The detailed information of tRNA gene sequence


Sequence ID>SRA1043838
Genome IDSRR035092.184376
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 40
End posion on genome 115
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttatattaa
tRNA gene sequence 
GGGGATATAGCTCAGTTGGCAGAGCGCTTCCATGGCATGGAAGAGGTCAAGGGTTCGAAT
CCCTTTATCTCCACAA
Downstream region at tRNA end position 
atatctttgc
Secondary structure (Cloverleaf model)
>SRA1043838	Ala	GGC
                   a      ACAA atatctttgc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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