The detailed information of tRNA gene sequence


Sequence ID>SRA1044079
Genome IDSRR035092.221178
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 131
End posion on genome 216
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gataaataat
tRNA gene sequence 
AGAAGGGTACTCAAATGGTAAGAGAGCTGGTTGCTAACCAGTCGGGTGTAAAAGCCTTGT
GGGTTCAAGTCCCGCCCCTTCTGCCA
Downstream region at tRNA end position 
gcaaaggaaa
Secondary structure (Cloverleaf model)
>SRA1044079	Ser	GCT
                   t      GCCA gcaaaggaaa
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
        A A        A      | + | | |     A
      T     A C T C       G T G G G     C
      G       | | |                 T T
      G     A G A G
        T A        A     CGGGTGTAAAAGCCTT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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