The detailed information of tRNA gene sequence


Sequence ID>SRA1044316
Genome IDSRR035092.257989
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 213
End posion on genome 123
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtaatatat
tRNA gene sequence 
GGAGAGGTGCCAGAGTTGGCTTATCGGTCTCCCCTGCTAAGGGAGTGGGGTGTAACAGCC
CCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tatttttata
Secondary structure (Cloverleaf model)
>SRA1044316	Ser	GCT
                   t      GCCA tatttttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C C       G T G G G     C
  G         +   | |                 T T
  C         T C G G
    T T A          T     TGGGGTGTAACAGCCCCC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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