The detailed information of tRNA gene sequence


Sequence ID>SRA1044414
Genome IDSRR035092.276076
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 188
End posion on genome 263
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gattaataac
tRNA gene sequence 
GGGGTTGTAGTGTAACGGCCTATCATCTGGGGCTCCAGACCTCAGGATTCGAGTTCAAAT
CTCGCCAACCCCAACA
Downstream region at tRNA end position 
atttaaaaat
Secondary structure (Cloverleaf model)
>SRA1044414	Trp	CCA
                   c      AACA atttaaaaat
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     C G C T C     A
      C A A        A        | | | |     A
    G       T G T G       T C G A G     C
    G         | | +                 T T
    C       T C A T
      C T A        C     GGAT
                    T - A
                    G - C
                    G + T
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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