The detailed information of tRNA gene sequence


Sequence ID>SRA1044427
Genome IDSRR035092.277776
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 45
End posion on genome 132
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gagccgccaT
tRNA gene sequence 
GGGCATATAGTTCATTGGTAGAACGGTAGGCTTACAATTTAATAAGAATCCTACTGGCGG
TAGGTTCGATTCCTGCTATGCCCATCA
Downstream region at tRNA end position 
taatctttat
Secondary structure (Cloverleaf model)
>SRA1044427	Val	TAC
                   T      ATCA taatctttat
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     A - T          T T
                    T     C G T C C     A
        T A        A      | + | | |     G
      T     C T T G       G T A G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     TAAGAATCCTACTGGCG
                    G   A
                    T - A
                    A - T
                    G + T
                    G + T
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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