The detailed information of tRNA gene sequence


Sequence ID>SRA1046325
Genome IDSRR035093.280400
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 346
End posion on genome 435
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgaaaaaaat
tRNA gene sequence 
GGACATGTGGTCTGAGCGGCGAAAGCACAAGTTTGCAAAACTTGAGAGATATAGTCTCCA
TCGGGGGTTCGATTCCCTCCATGTCCTCCA
Downstream region at tRNA end position 
tattctgggg
Secondary structure (Cloverleaf model)
>SRA1046325	Cys	GCA
                   t      TCCA tattctgggg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     C T C C C     A
      G A G        G      | + | | |     G
    C       T C T G       G G G G G     C
    G       |   + |                 T T
    G       A A G C
      C G A        A     AGAGATATAGTCTCCATC
                    C - G
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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