The detailed information of tRNA gene sequence


Sequence ID>SRA1046496
Genome IDSRR035093.319590
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 223
End posion on genome 300
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaatttttat
tRNA gene sequence 
GTCGGTGTAGCTAAATTGGCTAAGGCGGTAGATTGCAACCCTACAAATTACCGAGTTCGA
GTCTCGGCACCGATTCCA
Downstream region at tRNA end position 
ttttagattt
Secondary structure (Cloverleaf model)
>SRA1046496	Cys	GCA
                   t      TCCA ttttagattt
                     G + T
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G G C T C     A
      T A A        A      | | | | |     G
    T       A T C G       C C G A G     C
    G         + | |                 T T
    G       A G G C
      C T A        G     AAATTA
                    G - C
                    T - A
                    A - T
                    G - C
                    A   C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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