The detailed information of tRNA gene sequence


Sequence ID>SRA1048332
Genome IDSRR035094.149221
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 292
End posion on genome 216
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position
ctaatgagag
tRNA gene sequence
GCGCCTGTAGCTCAATCGGATAGAGTGGCTGGCTTCGAACCAGTAGGTTGGAGGTTCAAA
TCCTCCCAGGCGCGCCA
Downstream region at tRNA end position
attccgccaa
Secondary structure (Cloverleaf model)
>SRA1048332	Arg	TCG
                   g      GCCA attccgccaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C T C C     A
      T A A        A      | | | | |     A
    C       C T C G       G G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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