The detailed information of tRNA gene sequence


Sequence ID>SRA1049249
Genome IDSRR035095.44460
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 243
End posion on genome 155
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acaaaattat
tRNA gene sequence 
GGAAGGGTGGTAGAGTGGTCAATTACAACAGTTTCGAAAACTGTGCCCCTTTTTGGGGCC
CGTGAGTTCGAATCTCACCCCTTCCGCAA
Downstream region at tRNA end position 
cgtacgaaat
Secondary structure (Cloverleaf model)
>SRA1049249	Ser	CGA
                   t      GCAA cgtacgaaat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A T G       G T G A G     C
    G       + | | |                 T T
    T       T T A C
      C A A        A     GCCCCTTTTTGGGGCCC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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