The detailed information of tRNA gene sequence


Sequence ID>SRA1050167
Genome IDSRR035095.204330
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 141
End posion on genome 229
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaataaaaac
tRNA gene sequence 
GGAGTGGTGGCGTAATTGGTATCGCAATACTTTGCTAAAGTATCCATCGCAATTGCGGTG
TGCAGGTTCGAGTCCTGTCTGCTCCGCTA
Downstream region at tRNA end position 
aaggaacatt
Secondary structure (Cloverleaf model)
>SRA1050167	Ser	GCT
                   c      GCTA aaggaacatt
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G + T
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       T G C G       G C A G G     C
    G         | | |                 T T
    G       T C G C
      T A          A     CCATCGCAATTGCGGTGT
                    A - T
                    T - A
                    A - T
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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