The detailed information of tRNA gene sequence


Sequence ID>SRA1050169
Genome IDSRR035095.204547
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 260
End posion on genome 172
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tatcgactag
tRNA gene sequence 
GGAGCAGTGGCGGAATTGGTAGACGCAAAAGGTTGTCACCCTTTCGGTGCGAAAGCACTT
TGCGGGTTCGAATCCCGCCTGCTTCACCC
Downstream region at tRNA end position 
cataaaaaaa
Secondary structure (Cloverleaf model)
>SRA1050169	Asp	GTC
                   g      ACCC cataaaaaaa
                     G - C
                     G + T
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTGCGAAAGCACTTT
                    A - T
                    A - T
                    A - T
                    G - C
                    G - C
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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