The detailed information of tRNA gene sequence


Sequence ID>SRA1050432
Genome IDSRR035095.261982
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 255
End posion on genome 179
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttattgt
tRNA gene sequence 
GCGTCTGTGGTCTAACTGGCTAAGGCACTAGTCTCCAAAACTAGATGATGGGAGTTCAAA
TCTCTCCAGACGTGCCA
Downstream region at tRNA end position 
aaagaggagg
Secondary structure (Cloverleaf model)
>SRA1050432	Trp	CCA
                   t      GCCA aaagaggagg
                     G + T
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C A A        G      | + | | |     A
    T       T C T G       G G G A G     C
    G       | | + |                 T T
    G       A G G C
      C T A        A     ATGAT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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