The detailed information of tRNA gene sequence


Sequence ID>SRA1052482
Genome IDSRR035098.211884
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 426
End posion on genome 339
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
aataccgcaa
tRNA gene sequence
GGAGGAATGGCTGAGTGGCTGAAGGCATTGGTTTGCTAAATCAACGTATAGATTTTCTAT
ACCATGGGTTCGAATCCCATTTCCTCCGagg
Downstream region at tRNA end position
ggatgtagtt
Secondary structure (Cloverleaf model)
>SRA1052482	Ser	GCT
                   a      Gagg ggatgtagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A T G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        A     CGTATAGATTTTCTATACC
                    T - A
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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