The detailed information of tRNA gene sequence


Sequence ID>SRA1053959
Genome IDSRR035099.16782
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 117
End posion on genome 207
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aataaattta
tRNA gene sequence 
AGGAAGGGTGTCCGAGCGGTTTAAGGAGCCGGTCTTGAAAACCGGTAAAGTCTTAATGGC
TTTCGAGGGTTCGAATCCCTCCCTTCCGCCAa
Downstream region at tRNA end position 
attttatttt
Secondary structure (Cloverleaf model)
>SRA1053959	Ser	TGA
                   a      CCAa attttatttt
                     A   G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    G     C T C C C     A
    C G A G        T      | | | | |     G
  G         C C T G       G A G G G     C
  G           | +                   T T
  T         A G G A
    T T A          G     TAAAGTCTTAATGGCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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