The detailed information of tRNA gene sequence


Sequence ID>SRA1054339
Genome IDSRR035099.109534
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 136
End posion on genome 63
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacgatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTGGTTCGAGT
CCAGTCCCCGCTACtc
Downstream region at tRNA end position 
attatttaca
Secondary structure (Cloverleaf model)
>SRA1054339	Met	CAT
                   t      ACtc attatttaca
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G A C C     A
      T G A        G      | | | | |     G
    T       C G A G       A C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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