The detailed information of tRNA gene sequence


Sequence ID>SRA1054711
Genome IDSRR035099.192882
Search identical group
Phylum/Class454 Sequencing (SRP001820)
Species
Start position on genome 348
End posion on genome 260
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnT
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTTGAACGCGCTTGTCTTGAAAACAAGTGTCCGGGCAACTGGA
CCCAGGGTTCGAATCCCTGTCTCTCCGTat
Downstream region at tRNA end position 
ttgaataatt
Secondary structure (Cloverleaf model)
>SRA1054711	Ser	TGA
                   T      GTat ttgaataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G           | |                 T T
    T       A C G C
      T G A        G     TGTCCGGGCAACTGGACC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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