The detailed information of tRNA gene sequence


Sequence ID>SRA1000025
Genome IDSRR000283.1031
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 5
End posion on genome 88
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnaagt
tRNA gene sequence 
GGGCGACAGGCCGCAAGGTGTGGCAGGGGACTGTAACTCCCTCGCGGAGACGCACGCTAG
GTTCGATTCCTAGGTCGCCCACCA
Downstream region at tRNA end position 
ctttannnnn
Secondary structure (Cloverleaf model)
>SRA1000025	Tyr	GTA
                   t      ACCA ctttannnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          T T
                    A     G A T C C     A
        A C        G      | | | | |     G
      A     G C C G       C T A G G     C
      G     + | | |                 T T
      G     T G G C
        T G        A     CGCGGAGACGCACG
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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