The detailed information of tRNA gene sequence


Sequence ID>SRA1000277
Genome IDSRR001038.183353
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 13
End posion on genome 85
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggtcctatc
tRNA gene sequence 
GGGGGTTTAGCAATCTGGTGAATGCAGCAAACTCATAATTTGCCTAAGGTGAGTTCGATC
CTCACAACCCCTAttg
Downstream region at tRNA end position 
acggattccc
Secondary structure (Cloverleaf model)
>SRA1000277	Met	CAT
                   c      Attg acggattccc
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          C T
                    T     C A C T C     A
      T C T        A      | | | | |     G
    G       A A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      G A          A     CTAAG
                    G - C
                    C - G
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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