The detailed information of tRNA gene sequence


Sequence ID>SRA1000819
Genome IDSRR001047.169827
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 89
End posion on genome 16
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ccgctaaaaa
tRNA gene sequence 
TGAGATATGATGTAAAGGTAGCATAGAAAACTTTGACTTTTCTTGTATAGGTTCGACCCC
TATTATCTCAACAA
Downstream region at tRNA end position 
ttgaaaataa
Secondary structure (Cloverleaf model)
>SRA1000819	Gln	TTG
                   a      ACAA ttgaaaataa
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T          C C
                    T     T A T C C     A
        A A        G      | | | | |     G
      A     T G T A       A T A G G     C
      G     + | | |                 T T
      G     G C A T
        T A        A     TTGT
                    G - C
                    A - T
                    A - T
                    A - T
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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