The detailed information of tRNA gene sequence


Sequence ID>SRA1001049
Genome IDSRR001052.28849
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 103
End posion on genome 20
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgatggtgt
tRNA gene sequence 
GGAAGGGTGACAGAGGGGTCTATTGTGTCTGTTTTGAAAACAGAGGCCAGAAATGGTTCG
TGGGTTCGAATCTCACCCCTTCTTttt
Downstream region at tRNA end position 
aagtcttaat
Secondary structure (Cloverleaf model)
>SRA1001049	Ser	TGA
                   t      Tttt aagtcttaat
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      G G A        G      | | | + |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      C T A        G     GGCCAGAAATGGTTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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