The detailed information of tRNA gene sequence


Sequence ID>SRA1001052
Genome IDSRR001052.34832
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 29
End posion on genome 99
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ggcgagctca
tRNA gene sequence
TGTAGAGAGGACGAATGGTGAGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position
ggtaaaaggn
Secondary structure (Cloverleaf model)
>SRA1001052	Met	CAT
                   a      Cttt ggtaaaaggn
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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