The detailed information of tRNA gene sequence


Sequence ID>SRA1001066
Genome IDSRR001052.64136
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 30
End posion on genome 100
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcgagctca
tRNA gene sequence 
TGTAGAGAGGACGAATGGTGAGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
tggtaaaagg
Secondary structure (Cloverleaf model)
>SRA1001066	Met	CAT
                   a      Cttt tggtaaaagg
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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