The detailed information of tRNA gene sequence


Sequence ID>SRA1001069
Genome IDSRR001052.69500
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 37
End posion on genome 111
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taattctaaA
tRNA gene sequence 
GAACTGGTAGCTTAAGGGGTGAAGCTTATTGCTCATAACAATAAAAAAGTTGGTTCGATT
CCAATTCAGTTTTTtt
Downstream region at tRNA end position 
gggagtcggt
Secondary structure (Cloverleaf model)
>SRA1001069	Met	CAT
                   A      TTtt gggagtcggt
                     G + T
                     A - T
                     A - T
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     T A A C C     A
      G A A        A      + | | | |     G
    G       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      T G          T     AAAAA
                    T - A
                    A - T
                    T - A
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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