The detailed information of tRNA gene sequence


Sequence ID>SRA1001122
Genome IDSRR001052.176746
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 14
End posion on genome 87
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattctaaA
tRNA gene sequence 
GAACTGGTAGCTTAACGGGTGAAGCTTATTGCTCATAACAATAAAAAGTTGGTTCGATTC
CAATTCAGTTTTTgg
Downstream region at tRNA end position 
gatcggtatt
Secondary structure (Cloverleaf model)
>SRA1001122	Met	CAT
                   A      TTgg gatcggtatt
                     G + T
                     A - T
                     A - T
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     T A A C C     A
      C A A        A      + | | | |     G
    G       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      T G          T     AAAA
                    T - A
                    A - T
                    T - A
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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