The detailed information of tRNA gene sequence


Sequence ID>SRA1001172
Genome IDSRR001052.269694
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 87
End posion on genome 17
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcgagcnca
tRNA gene sequence 
TGTAGAGAGGACGAATGGTGAGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
ttgggtaaaa
Secondary structure (Cloverleaf model)
>SRA1001172	Met	CAT
                   a      Cttt ttgggtaaaa
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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