The detailed information of tRNA gene sequence


Sequence ID>SRA1001193
Genome IDSRR001052.316027
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 25
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ggcgagctca
tRNA gene sequence
TGTAGAGAGGACGAATGGTGAGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position
tgggtaaaaa
Secondary structure (Cloverleaf model)
>SRA1001193	Met	CAT
                   a      Cttt tgggtaaaaa
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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