The detailed information of tRNA gene sequence


Sequence ID>SRA1001202
Genome IDSRR001052.339659
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 99
End posion on genome 29
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcgagctca
tRNA gene sequence 
TGTAGAGAGGACGAATGGTGAGTCATCGGGATCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
tgggtaaaaa
Secondary structure (Cloverleaf model)
>SRA1001202	Met	CAT
                   a      Cttt tgggtaaaaa
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  A       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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