The detailed information of tRNA gene sequence


Sequence ID>SRA1001214
Genome IDSRR001053.43987
Search identical group
Phylum/ClassSolar Salterns, viral fraction from low salinity saltern in San Diego, CA (SRP000145)
Species
Start position on genome 83
End posion on genome 9
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tccaaacaat
tRNA gene sequence 
TGTAGATGGTCCCTCCGGTGGGGAGCGTGGCTGTTAACCACGAGGCGCGGGGTTCGAGTC
CCTGATCTACAGCCA
Downstream region at tRNA end position 
aacatgcann
Secondary structure (Cloverleaf model)
>SRA1001214	Asn	GTT
                   t      GCCA aacatgcann
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     T - A          T G
                    G     G T C C C     A
        C T        G      | + | | |     G
      C     C C C T       C G G G G     C
      G     | | | |                 T T
      G     G G G A
        T G        G     AGGCG
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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