The detailed information of tRNA gene sequence


Sequence ID>SRA1001394
Genome IDSRR001064.116232
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 77
End posion on genome 5
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tataataatt
tRNA gene sequence 
GGGCTGATCATATAATGGCTATTATGCTTGCCTTGCACGCAAGTCATCCGGGTTCGACTC
CCGGTCGGTCCACgt
Downstream region at tRNA end position 
tgnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001394	Ala	TGC
                   t      ACgt tgnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     G - C
                     A - T          T C
                    T     G G C C C     A
      T A A        C      | | | | |     G
    G       T A T A       C C G G G     C
    G         | | |                 T T
    C       T T A T
      T A          G     TCAT
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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