The detailed information of tRNA gene sequence


Sequence ID>SRA1001402
Genome IDSRR001064.154848
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 32
End posion on genome 116
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aattgaaaaT
tRNA gene sequence 
AGGTCTATGGTGTAATGGCAACATCCTTCTTTTACATGGAAGAGACGTGAAGTGTAATCT
CGGTTCGAGTCCGAGTAGACCTAAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001402	Val	TAC
                   T      AAnn nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     A - T          T G
                    T     G A G C C     A
        A A        G      | | | | |     G
      T     T G T G       C T C G G     C
      G     | | | +                 T T
      G     A C A T
        C A        C     AGACGTGAAGTGTAAT
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  T       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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