The detailed information of tRNA gene sequence


Sequence ID>SRA1001500
Genome IDSRR001067.27725
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 33
End posion on genome 105
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tattctctgT
tRNA gene sequence 
AAGAATGTGACAGAGGGGAGATGTGATTGCTTTGAAGCCAATATACGGGGGTTCGATTCC
CTCCTTTCTTGTta
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001500	Ser	TGA
                   T      GTta nnnnnnnnnn
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T
                     T   T
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      G     G A C A       G G G G G     C
      G       | | |                 T T
      G     A T G T
        A G        G     ATAC
                    A - T
                    T - A
                    T - A
                    G - C
                    C   C
                  T       G
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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