The detailed information of tRNA gene sequence


Sequence ID>SRA1001681
Genome IDSRR001080.35625
Search identical group
Phylum/ClassCoral Stressors, viral fraction from whole Porites compressa tissue extracts; a dissolved organic carbon (DOC) stressor experiment (SRP000168)
Species
Start position on genome 88
End posion on genome 17
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tggtgattaa
tRNA gene sequence 
TTCCGTATGGTGTAACGGTAGCACAGGAAGCTGTTAACTTTCTAGTCCTTGTTCGAATCA
AGGTACGGGAGCac
Downstream region at tRNA end position 
aaaaccctga
Secondary structure (Cloverleaf model)
>SRA1001681	Asn	GTT
                   a      GCac aaaaccctga
                     T - A
                     T + G
                     C - G
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     G G A A C     A
        A A        G      | | | | |     G
      C     T G T G       C C T T G     C
      G     + | | |                 T T
      G     G C A C
        T A        A     TAGT
                    G - C
                    G + T
                    A - T
                    A - T
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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