The detailed information of tRNA gene sequence


Sequence ID>SRA1001692
Genome IDSRR001088.37169
Search identical group
Phylum/ClassCoral Stressors, microbial fraction from whole Porites compressa tissue extracts; a nutrient stressor experiment (SRP000176)
Species
Start position on genome 29
End posion on genome 99
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcgagctca
tRNA gene sequence 
TGTAGAGAAGACGAATGGTGAGTCATCGGGCTCATGCCCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
tgggtaaaag
Secondary structure (Cloverleaf model)
>SRA1001692	Met	CAT
                   a      Cttt tgggtaaaag
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        A      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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