The detailed information of tRNA gene sequence


Sequence ID>SRA1001715
Genome IDSRR001308.11032
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 110
End posion on genome 40
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtcccctgct
tRNA gene sequence 
TTCTAGGTAACATAATGGTAATGTAGTTGACTGCAAATCAATAAATAGTGGTTCGATTCC
ACTCCTAGTCTtta
Downstream region at tRNA end position 
tgtgggaata
Secondary structure (Cloverleaf model)
>SRA1001715	Cys	GCA
                   t      Ttta tgtgggaata
                     T   C
                     T   T
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C          T T
                    T     T C A C C     A
        A A        A      | | | | |     G
      T     T A C A       A G T G G     C
      G     | | | |                 T T
      G     A T G T
        T A        A     AAAT
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK