The detailed information of tRNA gene sequence


Sequence ID>SRA1004025
Genome IDSRR002328.101447
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 102
End posion on genome 17
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttgcagc
tRNA gene sequence 
GGAGAGCTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGAGGTGAAAGCCTCC
TGGGGTTCGAATCCCTAGCTCTCCGCtt
Downstream region at tRNA end position 
atatagacaa
Secondary structure (Cloverleaf model)
>SRA1004025	Ser	TGA
                   c      GCtt atatagacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAGGTGAAAGCCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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