The detailed information of tRNA gene sequence


Sequence ID>SRA1008402
Genome IDSRR020490.345364
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 124
End posion on genome 215
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatttatca
tRNA gene sequence 
GGATTGATGACTGAGAGGTTTAAAGTATTGGTTTGCTAAATCAACGTATATCTATTAAAA
ATATACCATGGGTTCAAATCCCATTCAATCCAttt
Downstream region at tRNA end position 
tttaagctca
Secondary structure (Cloverleaf model)
>SRA1008402	Ser	GCT
                   a      Attt tttaagctca
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A
                     G - C
                     A - T          T A
                    T     T A C C C     A
      A G A        G      | | | | |     A
    G       G T C A       A T G G G     C
    G         | | |                 T T
    T       A A G T
      T T A        A     CGTATATCTATTAAAAATATACC
                    T - A
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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