The detailed information of tRNA gene sequence


Sequence ID>SRA1009808
Genome IDSRR020491.363833
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 55
End posion on genome 144
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcgggtccg
tRNA gene sequence 
GGAGGGATGCGAGAGCGGACGATTCGGCACGCCTGGAACGCGTGTGTGGCTTCACCGTCA
CCGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position 
atcaccggta
Secondary structure (Cloverleaf model)
>SRA1009808	Ser	GGA
                   g      GCCG atcaccggta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G       + | | |                 T T
    A       T T C G
      C G A        G     TGTGGCTTCACCGTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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