The detailed information of tRNA gene sequence


Sequence ID>SRA1017856
Genome IDSRR035082.207139
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 134
End posion on genome 60
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaggtat
tRNA gene sequence 
TGCGGGGTGTTGTAACGGAAACATAAGGGGCTCATGTCCCCTCCGCTCTCGGTTCGATTC
CGAGTCCCGCTACTA
Downstream region at tRNA end position 
attttctaaa
Secondary structure (Cloverleaf model)
>SRA1017856	Met	CAT
                   t      ACTA attttctaaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     G A G C C     A
        A A        G      | | | | |     G
      C     T G T T       C T C G G     C
      G     | | |                   T T
      G     A C A T
        A A        A     CCGCT
                    A - T
                    G - C
                    G - C
                    G - C
                    G - C
                  C       T
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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