The detailed information of tRNA gene sequence


Sequence ID>SRA1025349
Genome IDSRR035084.559702
Search identical group
Phylum/Class454 Sequencing (SRP001805)
Species
Start position on genome 82
End posion on genome 172
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaataattt
tRNA gene sequence 
GGAGAGATGACAGAGTCTGGTTTATCGTGATAGTCTTGAAAACTATTGTACCGAAAGGTA
CCGAAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
ataccaaacc
Secondary structure (Cloverleaf model)
>SRA1025349	Ser	TGA
                   t      GCAA ataccaaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G        | | | |     G
  T         G A C A       A A G G G     C
  G         +   | |                 T T
  G         T C G T
    T T T A        G     TGTACCGAAAGGTACCG
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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