The detailed information of tRNA gene sequence


Sequence ID>SRA1043942
Genome IDSRR035092.199362
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 204
End posion on genome 114
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggttctcaaa
tRNA gene sequence 
GGAGAAATGACAGAAATGGCAATTGTGTCCGTCTTGAAAATGGTAGCCACGGTAGATATT
CCGTGTGAGGGTTCGAGTCCTTCTTTCTCCGttt
Downstream region at tRNA end position 
agtttattgg
Secondary structure (Cloverleaf model)
>SRA1043942	Ser	TGA
                   a      Gttt agtttattgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T G
                    T     C T T C C     A
      A A A        G      | | + | |     G
    T       G A C A       G A G G G     C
    G       + | | |                 T T
    G       T T G T
      C A A        G     AGCCACGGTAGATATTCCGTGT
                    T   T
                    C - G
                    C - G
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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