The detailed information of tRNA gene sequence


Sequence ID>SRA1046508
Genome IDSRR035093.321951
Search identical group
Phylum/Class454 Sequencing (SRP001814)
Species
Start position on genome 411
End posion on genome 321
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcattttttt
tRNA gene sequence 
GGAAGATTGGCAGAGTCTGGTCGATTGCAATGAGTTGCTAACTCATGGTCTGAAATATGG
TTCGTTGGTTCAACTCCAACATCTTCCGCAA
Downstream region at tRNA end position 
ttttttggaa
Secondary structure (Cloverleaf model)
>SRA1046508	Ser	GCT
                   t      GCAA ttttttggaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T C
                    T     C A A C C     A
    C T G A        G      | | | | |     A
  T         G A C G       G T T G G     C
  G         + | | |                 T T
  G         T T G C
    T C G A        A     GGTCTGAAATATGGTTC
                    A - T
                    T - A
                    G - C
                    A - T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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