The detailed information of tRNA gene sequence


Sequence ID>SRA1053385
Genome IDSRR035098.396150
Search identical group
Phylum/Class454 Sequencing (SRP001819)
Species
Start position on genome 179
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggtgagcgc
tRNA gene sequence 
GGGGGTCTAGCAATCTGGTGAAATGCAGCGGGCTCATAATCCGCCTTAGCCGAGTTCGAT
CCTCGGGACCCCCATCA
Downstream region at tRNA end position 
accaataccc
Secondary structure (Cloverleaf model)
>SRA1053385	Met	CAT
                   c      ATCA accaataccc
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G          C T
                    T     G G C T C     A
      T C T        A      | | | | |     G
    G       A A C G       C C G A G     C
    G         | | |                 T T
    T       A T G C
      G A A        A     CTTAG
                    G - C
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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