The detailed information of tRNA gene sequence


Sequence ID>SRA1000771
Genome IDSRR001047.26444
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 21
End posion on genome 103
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgtggcgtaa
tRNA gene sequence 
GCCTCGGTGGTGAATTGGTATACACGAGGGACTCAAATCCCTTGCCGTAAGGCGTGTCGG
TTCGACCCCGACCCGAGGCACCA
Downstream region at tRNA end position 
ncttttcttg
Secondary structure (Cloverleaf model)
>SRA1000771	Leu	CAA
                   a      ACCA ncttttcttg
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          C C
                    T     C A G C C     A
      T T A        G      | | | | |     G
    G       A G T G       G T C G G     C
    G         | | |                 T T
    T       A C A C
      A T          G     GCCGTAAGGCGT
                    A - T
                    G + T
                    G - C
                    G - C
                    A   C
                  C       T
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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