The detailed information of tRNA gene sequence


Sequence ID>SRA1008593
Genome IDSRR020490.425617
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 250
End posion on genome 176
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agtggtaggc
tRNA gene sequence 
GGCGACGTGGCCGAGTGGTTAGGCGGAGGTCTGCAAAAACCTTATACAGCGGTTCAAATC
CGCTCGTCGCCTCCA
Downstream region at tRNA end position 
gatcaataaa
Secondary structure (Cloverleaf model)
>SRA1008593	Cys	GCA
                   c      TCCA gatcaataaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     A
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        T T        G     TATAC
                    G + T
                    A   C
                    G - C
                    G   A
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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