The detailed information of tRNA gene sequence


Sequence ID>SRA1012124
Genome IDSRR020493.187651
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 117
End posion on genome 43
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttccttttt
tRNA gene sequence 
GGCGTCTTGGCCGAGTGGCTAGGCAGAGGTCTGCAAAAACCTTTTACAGCGGTTCGAATC
CGCTAGACGCCTCTA
Downstream region at tRNA end position 
aaaccacggc
Secondary structure (Cloverleaf model)
>SRA1012124	Cys	GCA
                   t      TCTA aaaccacggc
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     TTTAC
                    G + T
                    A   C
                    G - C
                    G   A
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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