The detailed information of tRNA gene sequence


Sequence ID>ENV09000053
Genome IDABSN01002305
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 390
End posion on genome 464
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaagaccttT
tRNA gene sequence 
AGAGCCATGGTGTTCAATGGTAGCACAACGGTCTCCAAAACCGTTTGTAGAGGTTCAAAT
CCTCTTGGCTCTGAgt
Downstream region at tRNA end position 
tttaaataag
Secondary structure (Cloverleaf model)
>ENV09000053	Trp	CCA
                   T      GAgt tttaaataag
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T C T C C     A
      A C T        G      | | | | |     A
    A       T G T G       A G A G G     C
    T       + | | |                 T T
    G       G C A C
      G T A        A     TTGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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