The detailed information of tRNA gene sequence


Sequence ID>ENV09000102
Genome IDABSN01010352
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 208
End posion on genome 295
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttgcggc
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTCGATAGCGGCGGTCTTGAAAACCGTTGAACAGCAATGTTCC
AGGGGTTCGAATCCCTTTCTCTCCGCAA
Downstream region at tRNA end position 
cacgcttatc
Secondary structure (Cloverleaf model)
>ENV09000102	Ser	TGA
                   c      GCAA cacgcttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      C G A        G      | + | | |     G
    G       G T C G       A G G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        G     TGAACAGCAATGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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