The detailed information of tRNA gene sequence


Sequence ID>ENV09000112
Genome IDABSN01013078
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 659
End posion on genome 584
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttgcaat
tRNA gene sequence 
GGGCTCATAGCTCAGCTGGTAGAGCTTCCGGCTCATATCCGGGCGGTCTCAGGTTCGAAT
CCTGATGAGCCCGCCG
Downstream region at tRNA end position 
cagtttaggc
Secondary structure (Cloverleaf model)
>ENV09000112	Met	CAT
                   t      GCCG cagtttaggc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     A G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     CGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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