The detailed information of tRNA gene sequence


Sequence ID>ENV09000136
Genome IDABSN01016344
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 490
End posion on genome 415
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atgcgcgcgg
tRNA gene sequence 
GGCGCCGTACCCAAGTGGTTAAGGGAGCAGTCTGCAAAACTGCGATGCAGCGGTTCGACC
CCGCTCGGCGCCTCCA
Downstream region at tRNA end position 
aacctcgctt
Secondary structure (Cloverleaf model)
>ENV09000136	Cys	GCA
                   g      TCCA aacctcgctt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          C C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    G       A C C C       A G C G G     C
    G         | | |                 T T
    T       A G G G
      T A          A     GATGC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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