The detailed information of tRNA gene sequence


Sequence ID>ENV09000139
Genome IDABSN01017038
Search identical group
Phylum/ClassFreshwater sediment metagenome lwFormaldehyde_C1
Species
Start position on genome 489
End posion on genome 413
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggccagagc
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTCAGAGCAGAGGACTCATAATCCTTTGGTCGTTGGTTCAAG
TCCAACACGGCCTACCA
Downstream region at tRNA end position 
gttttactgg
Secondary structure (Cloverleaf model)
>ENV09000139	Met	CAT
                   c      ACCA gttttactgg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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